IL_7NFX_010

3D structure

PDB id

7NFX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUU*AUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NFX_010 not in the Motif Atlas

Homologous match to IL_1MFQ_002

Geometric discrepancy: 0.3428

The information below is about IL_1MFQ_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

7NFX|1|1|G|120
7NFX|1|1|U|121
7NFX|1|1|U|122
*
7NFX|1|1|A|228
7NFX|1|1|U|229
7NFX|1|1|C|230

Current chains

Chain 1

SRP RNA 7SL

Nearby chains

Chain u

Signal recognition particle subunit SRP68