IL_7NFX_046

3D structure

PDB id

7NFX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAAGG*CAGCAGCACUC

Length

16 nucleotides

Bulged bases

7NFX|1|5|G|933, 7NFX|1|5|A|935, 7NFX|1|5|C|936, 7NFX|1|5|U|937

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NFX|1|5|G|731
7NFX|1|5|A|732
7NFX|1|5|A|733
7NFX|1|5|G|734
7NFX|1|5|G|735
*
7NFX|1|5|C|928
7NFX|1|5|A|929
7NFX|1|5|G|930
7NFX|1|5|C|931
7NFX|1|5|A|932
7NFX|1|5|G|933
7NFX|1|5|C|934
7NFX|1|5|A|935
7NFX|1|5|C|936
7NFX|1|5|U|937
7NFX|1|5|C|938

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain M

60S ribosomal protein L14

Chain S

eL20