IL_7NFX_073

3D structure

PDB id

7NFX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUCGCACACGCAGU*AAUGG

Length

19 nucleotides

Bulged bases

7NFX|1|5|G|1697, 7NFX|1|5|C|1698, 7NFX|1|5|A|1699, 7NFX|1|5|C|1718, 7NFX|1|5|G|1724

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NFX|1|5|C|1694
7NFX|1|5|U|1695
7NFX|1|5|C|1696
7NFX|1|5|G|1697
7NFX|1|5|C|1698
7NFX|1|5|A|1699
7NFX|1|5|C|1718
7NFX|1|5|A|1719
7NFX|1|5|C|1720
7NFX|1|5|G|1721
7NFX|1|5|C|1722
7NFX|1|5|A|1723
7NFX|1|5|G|1724
7NFX|1|5|U|1725
*
7NFX|1|5|A|1837
7NFX|1|5|A|1838
7NFX|1|5|U|1839
7NFX|1|5|G|1840
7NFX|1|5|G|1842

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain F

uL30

Chain Q

eL18

Chain T

eL21

Chain b

60S ribosomal protein L29