IL_7NHK_041
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUAAGUG*CUAAA
- Length
- 12 nucleotides
- Bulged bases
- 7NHK|1|A|A|1182
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHK_041 not in the Motif Atlas
- Geometric match to IL_4WF9_039
- Geometric discrepancy: 0.098
- The information below is about IL_4WF9_039
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.6
- Basepair signature
- cWW-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 6
Unit IDs
7NHK|1|A|U|1057
7NHK|1|A|U|1058
7NHK|1|A|A|1059
7NHK|1|A|A|1060
7NHK|1|A|G|1061
7NHK|1|A|U|1062
7NHK|1|A|G|1063
*
7NHK|1|A|C|1179
7NHK|1|A|U|1180
7NHK|1|A|A|1181
7NHK|1|A|A|1182
7NHK|1|A|A|1183
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 8
- 50S ribosomal protein L36
- Chain M
- 50S ribosomal protein L13
Coloring options: