IL_7NHK_051
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AUGAGUAG*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHK_051 not in the Motif Atlas
- Homologous match to IL_4WF9_048
- Geometric discrepancy: 0.1095
- The information below is about IL_4WF9_048
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.4
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
7NHK|1|A|A|1298
7NHK|1|A|U|1299
7NHK|1|A|G|1300
7NHK|1|A|A|1301
7NHK|1|A|G|1302
7NHK|1|A|U|1303
7NHK|1|A|A|1304
7NHK|1|A|G|1305
*
7NHK|1|A|U|2024
7NHK|1|A|G|2025
7NHK|1|A|A|2026
7NHK|1|A|A|2027
7NHK|1|A|A|2028
7NHK|1|A|U|2029
7NHK|1|A|U|2030
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain I
- 50S ribosomal protein L4
- Chain V
- 50S ribosomal protein L22
Coloring options: