IL_7NHK_067
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 7NHK|1|A|G|2005
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHK_067 not in the Motif Atlas
- Homologous match to IL_4WF9_065
- Geometric discrepancy: 0.1112
- The information below is about IL_4WF9_065
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 11
Unit IDs
7NHK|1|A|A|1711
7NHK|1|A|C|1712
7NHK|1|A|U|1713
7NHK|1|A|C|1714
7NHK|1|A|G|1715
7NHK|1|A|G|1716
*
7NHK|1|A|C|2003
7NHK|1|A|U|2004
7NHK|1|A|G|2005
7NHK|1|A|U|2006
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain H
- 50S ribosomal protein L3
- Chain N
- 50S ribosomal protein L14
Coloring options: