IL_7NHK_160
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 7NHK|1|a|C|1081
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHK_160 not in the Motif Atlas
- Homologous match to IL_4LFB_044
- Geometric discrepancy: 0.1051
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_82453.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
7NHK|1|a|U|1079
7NHK|1|a|G|1080
7NHK|1|a|C|1081
7NHK|1|a|A|1082
7NHK|1|a|U|1083
*
7NHK|1|a|A|1230
7NHK|1|a|U|1231
7NHK|1|a|G|1232
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain b
- RNA (5'-R(P*GP*GP*AP*GP*GP*UP*AP*UP*GP*AP*CP*AP*A)-3')
- Chain d
- 30S ribosomal protein S3
- Chain k
- 30S ribosomal protein S10
- Chain o
- 30S ribosomal protein S14 type Z
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