IL_7NHL_053

3D structure

PDB id

7NHL (explore in PDB, NAKB, or RNA 3D Hub)

Description

VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUAAUCGUUUUAA*UAGAAAAU

Length

21 nucleotides

Bulged bases

7NHL|1|A|U|1456, 7NHL|1|A|A|1458

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NHL|1|A|A|1447
7NHL|1|A|U|1448
7NHL|1|A|A|1449
7NHL|1|A|A|1450
7NHL|1|A|U|1451
7NHL|1|A|C|1452
7NHL|1|A|G|1453
7NHL|1|A|U|1454
7NHL|1|A|U|1455
7NHL|1|A|U|1456
7NHL|1|A|U|1457
7NHL|1|A|A|1458
7NHL|1|A|A|1459
*
7NHL|1|A|U|1629
7NHL|1|A|A|1630
7NHL|1|A|G|1631
7NHL|1|A|A|1632
7NHL|1|A|A|1633
7NHL|1|A|A|1634
7NHL|1|A|A|1635
7NHL|1|A|U|1636

Current chains

Chain A

23S rRNA

Nearby chains