IL_7NHL_150
3D structure
- PDB id
- 7NHL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGUGUAG*CGCAGAGAUA
- Length
- 17 nucleotides
- Bulged bases
- 7NHL|1|a|A|710
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHL_150 not in the Motif Atlas
- Geometric match to IL_8C3A_440
- Geometric discrepancy: 0.3347
- The information below is about IL_8C3A_440
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_22252.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
7NHL|1|a|U|690
7NHL|1|a|G|691
7NHL|1|a|U|692
7NHL|1|a|G|693
7NHL|1|a|U|694
7NHL|1|a|A|695
7NHL|1|a|G|696
*
7NHL|1|a|C|707
7NHL|1|a|G|708
7NHL|1|a|C|709
7NHL|1|a|A|710
7NHL|1|a|G|711
7NHL|1|a|A|712
7NHL|1|a|G|713
7NHL|1|a|A|714
7NHL|1|a|U|715
7NHL|1|a|A|716
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain l
- 30S ribosomal protein S11
Coloring options: