IL_7NHL_187

3D structure

PDB id

7NHL (explore in PDB, NAKB, or RNA 3D Hub)

Description

VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

ACGAGGGGCC*GGUUACCGAAU

Length

21 nucleotides

Bulged bases

7NHL|1|A|U|940, 7NHL|1|A|G|944

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NHL|1|A|A|920
7NHL|1|A|C|921
7NHL|1|A|G|922
7NHL|1|A|A|923
7NHL|1|A|G|924
7NHL|1|A|G|925
7NHL|1|A|G|926
7NHL|1|A|G|927
7NHL|1|A|C|928
7NHL|1|A|C|929
*
7NHL|1|A|G|937
7NHL|1|A|G|938
7NHL|1|A|U|939
7NHL|1|A|U|940
7NHL|1|A|A|941
7NHL|1|A|C|942
7NHL|1|A|C|943
7NHL|1|A|G|944
7NHL|1|A|A|945
7NHL|1|A|A|946
7NHL|1|A|U|947

Current chains

Chain A

23S rRNA

Nearby chains

Chain P

50S ribosomal protein L16