IL_7NHM_043

3D structure

PDB id

7NHM (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAGUG*CUC

Length

8 nucleotides

Bulged bases

7NHM|1|A|A|1132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NHM_043 not in the Motif Atlas

Homologous match to IL_7RQB_044

Geometric discrepancy: 0.3027

The information below is about IL_7RQB_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NHM|1|A|G|1131
7NHM|1|A|A|1132
7NHM|1|A|G|1133
7NHM|1|A|U|1134
7NHM|1|A|G|1135
*
7NHM|1|A|C|1144
7NHM|1|A|U|1145
7NHM|1|A|C|1146

Current chains

Chain A

23S rRNA

Nearby chains

Chain 9

50S ribosomal protein L36