IL_7NHM_053

3D structure

PDB id

7NHM (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAAU*AAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NHM_053 not in the Motif Atlas

Geometric match to IL_4KZD_002

Geometric discrepancy: 0.3256

The information below is about IL_4KZD_002

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.15

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

34

Unit IDs

7NHM|1|A|U|1448
7NHM|1|A|A|1449
7NHM|1|A|A|1450
7NHM|1|A|U|1451
*
7NHM|1|A|A|1632
7NHM|1|A|A|1633
7NHM|1|A|A|1634
7NHM|1|A|A|1635

Current chains

Chain A

23S rRNA

Nearby chains