IL_7NHM_059

3D structure

PDB id

7NHM (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAAG*UGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NHM_059 not in the Motif Atlas

Geometric match to IL_4LFB_060

Geometric discrepancy: 0.1389

The information below is about IL_4LFB_060

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.15

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

34

Unit IDs

7NHM|1|A|U|1519
7NHM|1|A|A|1520
7NHM|1|A|A|1521
7NHM|1|A|G|1522
*
7NHM|1|A|U|1558
7NHM|1|A|G|1559
7NHM|1|A|A|1560
7NHM|1|A|G|1561

Current chains

Chain A

23S rRNA

Nearby chains