IL_7NHM_095

3D structure

PDB id

7NHM (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CA*UACG

Length

6 nucleotides

Bulged bases

7NHM|1|A|A|2599, 7NHM|1|A|C|2600

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NHM_095 not in the Motif Atlas

Geometric match to IL_7RQB_098

Geometric discrepancy: 0.0927

The information below is about IL_7RQB_098

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_71530.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

7NHM|1|A|C|2539
7NHM|1|A|A|2540
*
7NHM|1|A|U|2598
7NHM|1|A|A|2599
7NHM|1|A|C|2600
7NHM|1|A|G|2601

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L3

Chain M

50S ribosomal protein L13