IL_7NHM_131
3D structure
- PDB id
- 7NHM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAAG*CGGUAC
- Length
- 11 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHM_131 not in the Motif Atlas
- Homologous match to IL_4LFB_018
- Geometric discrepancy: 0.2001
- The information below is about IL_4LFB_018
- Detailed Annotation
- 6x5 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_88269.3
- Basepair signature
- cWW-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7NHM|1|a|G|454
7NHM|1|a|G|455
7NHM|1|a|A|456
7NHM|1|a|A|457
7NHM|1|a|G|458
*
7NHM|1|a|C|491
7NHM|1|a|G|492
7NHM|1|a|G|493
7NHM|1|a|U|494
7NHM|1|a|A|495
7NHM|1|a|C|496
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain e
- 30S ribosomal protein S4
- Chain q
- 30S ribosomal protein S16
Coloring options: