IL_7NHN_023
3D structure
- PDB id
- 7NHN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 7NHN|1|A|C|822, 7NHN|1|A|A|834, 7NHN|1|A|A|835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHN_023 not in the Motif Atlas
- Geometric match to IL_4V9F_030
- Geometric discrepancy: 0.0774
- The information below is about IL_4V9F_030
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_57881.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
7NHN|1|A|G|821
7NHN|1|A|C|822
7NHN|1|A|G|823
*
7NHN|1|A|C|833
7NHN|1|A|A|834
7NHN|1|A|A|835
7NHN|1|A|U|836
7NHN|1|A|C|837
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 7
- 50S ribosomal protein L34
- Chain G
- 50S ribosomal protein L2
- Chain I
- 50S ribosomal protein L4
- Chain V
- 50S ribosomal protein L22
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