IL_7NHN_066
3D structure
- PDB id
- 7NHN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGUAAC*GGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 7NHN|1|A|G|1748
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHN_066 not in the Motif Atlas
- Geometric match to IL_7RQB_068
- Geometric discrepancy: 0.0914
- The information below is about IL_7RQB_068
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_65969.2
- Basepair signature
- cWW-tSH-tSH-tHH-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
7NHN|1|A|C|1735
7NHN|1|A|G|1736
7NHN|1|A|U|1737
7NHN|1|A|A|1738
7NHN|1|A|A|1739
7NHN|1|A|C|1740
*
7NHN|1|A|G|1745
7NHN|1|A|G|1746
7NHN|1|A|A|1747
7NHN|1|A|G|1748
7NHN|1|A|A|1749
7NHN|1|A|A|1750
7NHN|1|A|G|1751
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: