IL_7NHN_090
3D structure
- PDB id
- 7NHN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAG*CGCAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHN_090 not in the Motif Atlas
- Homologous match to IL_4WF9_086
- Geometric discrepancy: 0.2527
- The information below is about IL_4WF9_086
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_14250.2
- Basepair signature
- cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 11
Unit IDs
7NHN|1|A|C|2330
7NHN|1|A|A|2331
7NHN|1|A|G|2332
*
7NHN|1|A|C|2350
7NHN|1|A|G|2351
7NHN|1|A|C|2352
7NHN|1|A|A|2353
7NHN|1|A|G|2354
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain J
- 50S ribosomal protein L5
- Chain R
- 50S ribosomal protein L18
- Chain Z
- 50S ribosomal protein L27
Coloring options: