IL_7NHN_134
3D structure
- PDB id
- 7NHN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGAAGAAG*CGUAAAG
- Length
- 15 nucleotides
- Bulged bases
- 7NHN|1|a|A|422
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NHN_134 not in the Motif Atlas
- Homologous match to IL_4LFB_017
- Geometric discrepancy: 0.1798
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62329.1
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
7NHN|1|a|U|419
7NHN|1|a|G|420
7NHN|1|a|A|421
7NHN|1|a|A|422
7NHN|1|a|G|423
7NHN|1|a|A|424
7NHN|1|a|A|425
7NHN|1|a|G|426
*
7NHN|1|a|C|437
7NHN|1|a|G|438
7NHN|1|a|U|439
7NHN|1|a|A|440
7NHN|1|a|A|441
7NHN|1|a|A|442
7NHN|1|a|G|443
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain e
- 30S ribosomal protein S4
Coloring options: