IL_7NQH_051

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NQH_051 not in the Motif Atlas

Geometric match to IL_4WF9_017

Geometric discrepancy: 0.1197

The information below is about IL_4WF9_017

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.4

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

95

Unit IDs

7NQH|1|BA|C|181
7NQH|1|BA|C|182
7NQH|1|BA|U|183
*
7NQH|1|BA|A|192
7NQH|1|BA|U|193
7NQH|1|BA|G|194

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B5

bL32m

Chain BP

uL15m

Chain BU

Mitochondrial ribosomal protein L20

Chain BV

Mitochondrial ribosomal protein L21