IL_7NQH_066
3D structure
- PDB id
- 7NQH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AUGAGUAA*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NQH_066 not in the Motif Atlas
- Homologous match to IL_5J7L_289
- Geometric discrepancy: 0.1335
- The information below is about IL_5J7L_289
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7NQH|1|BA|A|640
7NQH|1|BA|U|641
7NQH|1|BA|G|642
7NQH|1|BA|A|643
7NQH|1|BA|G|644
7NQH|1|BA|U|645
7NQH|1|BA|A|646
7NQH|1|BA|A|647
*
7NQH|1|BA|U|1006
7NQH|1|BA|G|1007
7NQH|1|BA|A|1008
7NQH|1|BA|A|1009
7NQH|1|BA|A|1010
7NQH|1|BA|U|1011
7NQH|1|BA|U|1012
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain B5
- bL32m
- Chain BF
- Mitochondrial ribosomal protein L4
- Chain BR
- bL17m
- Chain BU
- Mitochondrial ribosomal protein L20
- Chain BW
- uL22m
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