3D structure

PDB id
7NQH (explore in PDB, NAKB, or RNA 3D Hub)
Description
55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CAUAAUCACUUG*CUUG
Length
16 nucleotides
Bulged bases
7NQH|1|BA|A|933, 7NQH|1|BA|U|939, 7NQH|1|BA|U|958
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NQH|1|BA|C|929
7NQH|1|BA|A|930
7NQH|1|BA|U|931
7NQH|1|BA|A|932
7NQH|1|BA|A|933
7NQH|1|BA|U|934
7NQH|1|BA|C|935
7NQH|1|BA|A|936
7NQH|1|BA|C|937
7NQH|1|BA|U|938
7NQH|1|BA|U|939
7NQH|1|BA|G|940
*
7NQH|1|BA|C|956
7NQH|1|BA|U|957
7NQH|1|BA|U|958
7NQH|1|BA|G|959

Current chains

Chain BA
16S rRNA

Nearby chains

Chain AA
Small subunit ribosomal RNA; SSU rRNA
Chain AV
tRNAMet
Chain An
Aurora kinase A interacting protein 1
Chain BL
Peptide chain release factor 1-like, mitochondrial

Coloring options:

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