IL_7NQH_088
3D structure
- PDB id
- 7NQH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UCUAG*CAAAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NQH_088 not in the Motif Atlas
- Geometric match to IL_5J7L_274
- Geometric discrepancy: 0.1885
- The information below is about IL_5J7L_274
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
7NQH|1|BA|U|1192
7NQH|1|BA|C|1193
7NQH|1|BA|U|1194
7NQH|1|BA|A|1195
7NQH|1|BA|G|1196
*
7NQH|1|BA|C|1207
7NQH|1|BA|A|1208
7NQH|1|BA|A|1209
7NQH|1|BA|A|1210
7NQH|1|BA|A|1211
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain B0
- Mitochondrial ribosomal protein L27
- Chain B6
- bL33m
- Chain B8
- Mitochondrial ribosomal protein L35
- Chain BS
- Mitochondrial ribosomal protein L18
- Chain Bb
- Mitochondrial ribosomal protein L38
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