IL_7NQH_089

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AG*CCU

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NQH_089 not in the Motif Atlas

Homologous match to IL_4WF9_089

Geometric discrepancy: 0.094

The information below is about IL_4WF9_089

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_15011.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

48

Unit IDs

7NQH|1|BA|A|1276
7NQH|1|BA|G|1277
*
7NQH|1|BA|C|1321
7NQH|1|BA|C|1322
7NQH|1|BA|U|1323

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BE

ICT1

Chain BL

Peptide chain release factor 1-like, mitochondrial

Chain Bt

Mitochondrial ribosomal protein L57