IL_7NQH_092
3D structure
- PDB id
- 7NQH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AUC*GGUUU
- Length
- 8 nucleotides
- Bulged bases
- 7NQH|1|BA|U|1314
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NQH_092 not in the Motif Atlas
- Geometric match to IL_4WF9_092
- Geometric discrepancy: 0.2141
- The information below is about IL_4WF9_092
- Detailed Annotation
- Major groove minor groove platform with extra cWW
- Broad Annotation
- Major groove minor groove platform with extra cWW
- Motif group
- IL_36931.2
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 24
Unit IDs
7NQH|1|BA|A|1282
7NQH|1|BA|U|1283
7NQH|1|BA|C|1284
*
7NQH|1|BA|G|1312
7NQH|1|BA|G|1313
7NQH|1|BA|U|1314
7NQH|1|BA|U|1315
7NQH|1|BA|U|1316
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BJ
- Mitochondrial ribosomal protein L10
- Chain BL
- Peptide chain release factor 1-like, mitochondrial
- Chain BQ
- uL16m
- Chain Bt
- Mitochondrial ribosomal protein L57
Coloring options: