IL_7NQH_106

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUUGCCAAUUCAG*CUUAUG

Length

19 nucleotides

Bulged bases

7NQH|1|AA|C|599, 7NQH|1|AA|C|600, 7NQH|1|AA|U|604, 7NQH|1|AA|U|697, 7NQH|1|AA|U|699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NQH|1|AA|C|595
7NQH|1|AA|U|596
7NQH|1|AA|U|597
7NQH|1|AA|G|598
7NQH|1|AA|C|599
7NQH|1|AA|C|600
7NQH|1|AA|A|601
7NQH|1|AA|A|602
7NQH|1|AA|U|603
7NQH|1|AA|U|604
7NQH|1|AA|C|605
7NQH|1|AA|A|606
7NQH|1|AA|G|607
*
7NQH|1|AA|C|695
7NQH|1|AA|U|696
7NQH|1|AA|U|697
7NQH|1|AA|A|698
7NQH|1|AA|U|699
7NQH|1|AA|G|700

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AE

Mitochondrial ribosomal protein S5

Chain AN

Mitochondrial ribosomal protein S14

Chain Ai

mS33

Chain Ao

Pentatricopeptide repeat domain 3