IL_7NQH_109

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGAACUCGG*CUGUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NQH_109 not in the Motif Atlas

Homologous match to IL_4WF9_117

Geometric discrepancy: 0.1236

The information below is about IL_4WF9_117

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_80252.1

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

10

Unit IDs

7NQH|1|BA|G|801
7NQH|1|BA|G|802
7NQH|1|BA|A|803
7NQH|1|BA|A|804
7NQH|1|BA|C|805
7NQH|1|BA|U|806
7NQH|1|BA|C|807
7NQH|1|BA|G|808
7NQH|1|BA|G|809
*
7NQH|1|BA|C|985
7NQH|1|BA|U|986
7NQH|1|BA|G|987
7NQH|1|BA|U|988
7NQH|1|BA|C|989

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BE

ICT1

Chain BO

uL14m

Chain BT

Mitochondrial ribosomal protein L19