IL_7NQL_025

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGU*AC

Length

5 nucleotides

Bulged bases

7NQL|1|AA|G|530

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NQL_025 not in the Motif Atlas

Homologous match to IL_4LFB_036

Geometric discrepancy: 0.2435

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

7NQL|1|AA|G|529
7NQL|1|AA|G|530
7NQL|1|AA|U|531
*
7NQL|1|AA|A|834
7NQL|1|AA|C|835

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AX

mRNA

Chain Am

mS37