IL_7NQL_036

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

7NQL|1|AA|C|844, 7NQL|1|AA|A|929

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NQL_036 not in the Motif Atlas

Homologous match to IL_6CZR_165

Geometric discrepancy: 0.1315

The information below is about IL_6CZR_165

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

7NQL|1|AA|C|843
7NQL|1|AA|C|844
7NQL|1|AA|G|845
*
7NQL|1|AA|C|927
7NQL|1|AA|A|928
7NQL|1|AA|A|929
7NQL|1|AA|G|930

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AV

fMet-tRNAMet (P site)

Chain AX

mRNA

Chain An

Aurora kinase A interacting protein 1