IL_7NQL_057

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCA*UAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NQL_057 not in the Motif Atlas

Geometric match to IL_4WF9_042

Geometric discrepancy: 0.1182

The information below is about IL_4WF9_042

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.4

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

215

Unit IDs

7NQL|1|BA|C|259
7NQL|1|BA|C|260
7NQL|1|BA|A|261
*
7NQL|1|BA|U|316
7NQL|1|BA|A|317
7NQL|1|BA|G|318

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B7

Mitochondrial ribosomal protein L34

Chain BD

uL2m

Chain Be

Mitochondrial ribosomal protein L41