IL_7NQL_086

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AUU*ACU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NQL_086 not in the Motif Atlas

Homologous match to IL_5J7L_326

Geometric discrepancy: 0.2704

The information below is about IL_5J7L_326

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_28037.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

7NQL|1|BA|A|1080
7NQL|1|BA|U|1081
7NQL|1|BA|U|1082
*
7NQL|1|BA|A|1134
7NQL|1|BA|C|1135
7NQL|1|BA|U|1136

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B1

Mitochondrial ribosomal protein L28

Chain BI

Mitochondrial ribosomal protein L9