IL_7NQL_093
3D structure
- PDB id
- 7NQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AUC*GGUUU
- Length
- 8 nucleotides
- Bulged bases
- 7NQL|1|BA|U|1314
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NQL_093 not in the Motif Atlas
- Geometric match to IL_7RQB_094
- Geometric discrepancy: 0.2396
- The information below is about IL_7RQB_094
- Detailed Annotation
- Major groove minor groove platform with extra cWW
- Broad Annotation
- Major groove minor groove platform; mini C-loop
- Motif group
- IL_92788.2
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 14
Unit IDs
7NQL|1|BA|A|1282
7NQL|1|BA|U|1283
7NQL|1|BA|C|1284
*
7NQL|1|BA|G|1312
7NQL|1|BA|G|1313
7NQL|1|BA|U|1314
7NQL|1|BA|U|1315
7NQL|1|BA|U|1316
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BJ
- Mitochondrial ribosomal protein L10
- Chain BL
- Peptidyl-tRNA hydrolase ICT1, mitochondrial
- Chain BQ
- uL16m
- Chain Bt
- Mitochondrial ribosomal protein L57
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