IL_7NQL_097

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CA*UACG

Length

6 nucleotides

Bulged bases

7NQL|1|BA|A|1395, 7NQL|1|BA|C|1396

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NQL_097 not in the Motif Atlas

Geometric match to IL_5J7L_341

Geometric discrepancy: 0.0776

The information below is about IL_5J7L_341

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

7NQL|1|BA|C|1335
7NQL|1|BA|A|1336
*
7NQL|1|BA|U|1394
7NQL|1|BA|A|1395
7NQL|1|BA|C|1396
7NQL|1|BA|G|1397

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BE

ICT1

Chain BL

Peptidyl-tRNA hydrolase ICT1, mitochondrial

Chain BN

uL13m