IL_7NQL_108

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUUGCCAAUUCAG*CUUAUG

Length

19 nucleotides

Bulged bases

7NQL|1|AA|C|599, 7NQL|1|AA|C|600, 7NQL|1|AA|U|604, 7NQL|1|AA|U|697, 7NQL|1|AA|U|699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NQL|1|AA|C|595
7NQL|1|AA|U|596
7NQL|1|AA|U|597
7NQL|1|AA|G|598
7NQL|1|AA|C|599
7NQL|1|AA|C|600
7NQL|1|AA|A|601
7NQL|1|AA|A|602
7NQL|1|AA|U|603
7NQL|1|AA|U|604
7NQL|1|AA|C|605
7NQL|1|AA|A|606
7NQL|1|AA|G|607
*
7NQL|1|AA|C|695
7NQL|1|AA|U|696
7NQL|1|AA|U|697
7NQL|1|AA|A|698
7NQL|1|AA|U|699
7NQL|1|AA|G|700

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AE

Mitochondrial ribosomal protein S5

Chain AN

Mitochondrial ribosomal protein S14

Chain Ai

mS33

Chain Ao

Pentatricopeptide repeat domain 3