3D structure

PDB id
7NQL (explore in PDB, NAKB, or RNA 3D Hub)
Description
55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
UUUUAA*UAACCAUAACA
Length
17 nucleotides
Bulged bases
7NQL|1|BA|A|1217, 7NQL|1|BA|U|1218, 7NQL|1|BA|C|1221
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NQL|1|BA|U|1186
7NQL|1|BA|U|1187
7NQL|1|BA|U|1188
7NQL|1|BA|U|1189
7NQL|1|BA|A|1190
7NQL|1|BA|A|1191
*
7NQL|1|BA|U|1212
7NQL|1|BA|A|1213
7NQL|1|BA|A|1214
7NQL|1|BA|C|1215
7NQL|1|BA|C|1216
7NQL|1|BA|A|1217
7NQL|1|BA|U|1218
7NQL|1|BA|A|1219
7NQL|1|BA|A|1220
7NQL|1|BA|C|1221
7NQL|1|BA|A|1222

Current chains

Chain BA
16S rRNA

Nearby chains

Chain B0
Mitochondrial ribosomal protein L27
Chain B6
bL33m
Chain B8
Mitochondrial ribosomal protein L35
Chain BS
Mitochondrial ribosomal protein L18
Chain Bu
mL62 (ICT1)
Chain Bv
mL64

Coloring options:

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