3D structure

PDB id
7NRC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
UGG*CUUUGUA
Length
10 nucleotides
Bulged bases
7NRC|1|LA|U|252
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NRC|1|LA|U|169
7NRC|1|LA|G|170
7NRC|1|LA|G|171
*
7NRC|1|LA|C|247
7NRC|1|LA|U|248
7NRC|1|LA|U|249
7NRC|1|LA|U|250
7NRC|1|LA|G|251
7NRC|1|LA|U|252
7NRC|1|LA|A|253

Current chains

Chain LA
25S rRNA (3184-MER)

Nearby chains

Chain LJ
60S ribosomal protein L8-A
Chain LN
60S ribosomal protein L13-A
Chain Lj
60S ribosomal protein L35-A

Coloring options:

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