IL_7NRC_114
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 7NRC|1|LA|A|2971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NRC_114 not in the Motif Atlas
- Geometric match to IL_7RQB_101
- Geometric discrepancy: 0.111
- The information below is about IL_7RQB_101
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_37497.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 118
Unit IDs
7NRC|1|LA|C|2960
7NRC|1|LA|G|2961
*
7NRC|1|LA|C|2970
7NRC|1|LA|A|2971
7NRC|1|LA|G|2972
Current chains
- Chain LA
- 25S rRNA (3184-MER)
Nearby chains
- Chain LD
- 60S ribosomal protein L2-A
- Chain LL
- 60S ribosomal protein L10
- Chain Ls
- eiF5A
- Chain Sm
- Transfer RNA; tRNA
- Chain Sn
- Transfer RNA; tRNA
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