IL_7NRC_148
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GU*AUC
- Length
- 5 nucleotides
- Bulged bases
- 7NRC|1|LC|U|90
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NRC_148 not in the Motif Atlas
- Homologous match to IL_5TBW_146
- Geometric discrepancy: 0.1601
- The information below is about IL_5TBW_146
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
7NRC|1|LC|G|68
7NRC|1|LC|U|69
*
7NRC|1|LC|A|89
7NRC|1|LC|U|90
7NRC|1|LC|C|91
Current chains
- Chain LC
- 5.8S rRNA (158-MER)
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain La
- 60S ribosomal protein L26-A
- Chain Lj
- 60S ribosomal protein L35-A
- Chain Ln
- 60S ribosomal protein L39
Coloring options: