3D structure

PDB id
7NRC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
GACGUUU*AUCGUAAU
Length
15 nucleotides
Bulged bases
7NRC|1|S2|A|856
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NRC|1|S2|G|816
7NRC|1|S2|A|817
7NRC|1|S2|C|818
7NRC|1|S2|G|819
7NRC|1|S2|U|820
7NRC|1|S2|U|821
7NRC|1|S2|U|822
*
7NRC|1|S2|A|850
7NRC|1|S2|U|851
7NRC|1|S2|C|852
7NRC|1|S2|G|853
7NRC|1|S2|U|854
7NRC|1|S2|A|855
7NRC|1|S2|A|856
7NRC|1|S2|U|857

Current chains

Chain S2
18S rRNA (1771-MER)

Nearby chains

Chain LT
60S ribosomal protein L19-A
Chain SU
40S ribosomal protein S7-A

Coloring options:

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