IL_7NRC_201
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUG*CC
- Length
- 5 nucleotides
- Bulged bases
- 7NRC|1|S2|U|1052
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NRC_201 not in the Motif Atlas
- Geometric match to IL_3TZR_002
- Geometric discrepancy: 0.3919
- The information below is about IL_3TZR_002
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
7NRC|1|S2|G|1051
7NRC|1|S2|U|1052
7NRC|1|S2|G|1053
*
7NRC|1|S2|C|1066
7NRC|1|S2|C|1067
Current chains
- Chain S2
- 18S rRNA (1771-MER)
Nearby chains
- Chain SG
- 40S ribosomal protein S17-B
- Chain SP
- 40S ribosomal protein S0-A
- Chain SQ
- 40S ribosomal protein S1-A
- Chain Sf
- 40S ribosomal protein S27-A
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