IL_7NRC_202

3D structure

PDB id

7NRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UUUU*AAUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NRC|1|S2|U|1055
7NRC|1|S2|U|1056
7NRC|1|S2|U|1057
7NRC|1|S2|U|1058
*
7NRC|1|S2|A|1061
7NRC|1|S2|A|1062
7NRC|1|S2|U|1063
7NRC|1|S2|G|1064

Current chains

Chain S2

18S rRNA (1771-MER)

Nearby chains

Chain SQ

40S ribosomal protein S1-A

Chain Sf

40S ribosomal protein S27-A