3D structure

PDB id
7NRC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
AUAAGGA*UUU
Length
10 nucleotides
Bulged bases
7NRC|1|S2|G|1228
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NRC|1|S2|A|1224
7NRC|1|S2|U|1225
7NRC|1|S2|A|1226
7NRC|1|S2|A|1227
7NRC|1|S2|G|1228
7NRC|1|S2|G|1229
7NRC|1|S2|A|1230
*
7NRC|1|S2|U|1257
7NRC|1|S2|U|1258
7NRC|1|S2|U|1259

Current chains

Chain S2
18S rRNA (1771-MER)

Nearby chains

Chain SC
40S ribosomal protein S10-A
Chain SD
40S ribosomal protein S12
Chain SN
40S ribosomal protein S31

Coloring options:

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