IL_7NSI_013

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GAG*CCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSI_013 not in the Motif Atlas

Geometric match to IL_4YHW_001

Geometric discrepancy: 0.1219

The information below is about IL_4YHW_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

7NSI|1|AA|G|226
7NSI|1|AA|A|227
7NSI|1|AA|G|228
*
7NSI|1|AA|C|269
7NSI|1|AA|C|270
7NSI|1|AA|C|271

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AE

28S ribosomal protein S5, mitochondrial isoform X2

Chain Ap

28S ribosomal protein S18b, mitochondrial