IL_7NSI_020
3D structure
- PDB id
- 7NSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- CCA*UG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NSI_020 not in the Motif Atlas
- Geometric match to IL_3WBM_004
- Geometric discrepancy: 0.2616
- The information below is about IL_3WBM_004
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_18188.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7NSI|1|AA|C|373
7NSI|1|AA|C|374
7NSI|1|AA|A|375
*
7NSI|1|AA|U|382
7NSI|1|AA|G|383
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AF
- Mitochondrial ribosomal protein S6
- Chain AR
- 28S ribosomal protein S18c, mitochondrial isoform 1
- Chain AU
- 28S ribosomal protein S21, mitochondrial
- Chain Am
- Coiled-coil-helix-coiled-coil-helix domain containing 1
Coloring options: