IL_7NSI_031

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CA*UAG

Length

5 nucleotides

Bulged bases

7NSI|1|AA|A|681

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSI_031 not in the Motif Atlas

Homologous match to IL_4LFB_046

Geometric discrepancy: 0.1661

The information below is about IL_4LFB_046

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

170

Unit IDs

7NSI|1|AA|C|620
7NSI|1|AA|A|621
*
7NSI|1|AA|U|680
7NSI|1|AA|A|681
7NSI|1|AA|G|682

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AC

28S ribosomal protein S24, mitochondrial

Chain AE

28S ribosomal protein S5, mitochondrial isoform X2

Chain AJ

28S ribosomal protein S10, mitochondrial

Chain AN

28S ribosomal protein S14, mitochondrial