IL_7NSI_033
3D structure
- PDB id
- 7NSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- CAAA*UAAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NSI_033 not in the Motif Atlas
- Geometric match to IL_1SAQ_002
- Geometric discrepancy: 0.2173
- The information below is about IL_1SAQ_002
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.13
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
7NSI|1|AA|C|629
7NSI|1|AA|A|630
7NSI|1|AA|A|631
7NSI|1|AA|A|632
*
7NSI|1|AA|U|652
7NSI|1|AA|A|653
7NSI|1|AA|A|654
7NSI|1|AA|G|655
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AB
- 28S ribosomal protein S2, mitochondrial
- Chain AC
- 28S ribosomal protein S24, mitochondrial
- Chain AE
- 28S ribosomal protein S5, mitochondrial isoform X2
- Chain AI
- 28S ribosomal protein S9, mitochondrial
- Chain Ak
- 28S ribosomal protein S35, mitochondrial isoform 1
Coloring options: