IL_7NSI_040

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CCU*AAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSI_040 not in the Motif Atlas

Homologous match to IL_5J7L_061

Geometric discrepancy: 0.2853

The information below is about IL_5J7L_061

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

7NSI|1|AA|C|857
7NSI|1|AA|C|858
7NSI|1|AA|U|859
*
7NSI|1|AA|A|911
7NSI|1|AA|A|912
7NSI|1|AA|G|913

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AL

Mitoribosomal protein us12m, mrps12

Chain An

Aurora kinase A interacting protein 1

Chain BA

Large subunit ribosomal RNA; LSU rRNA