IL_7NSI_046
3D structure
- PDB id
- 7NSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- CU*ACG
- Length
- 5 nucleotides
- Bulged bases
- 7NSI|1|BA|C|104
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NSI_046 not in the Motif Atlas
- Homologous match to IL_7A0S_002
- Geometric discrepancy: 0.4046
- The information below is about IL_7A0S_002
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 175
Unit IDs
7NSI|1|BA|C|12
7NSI|1|BA|U|13
*
7NSI|1|BA|A|103
7NSI|1|BA|C|104
7NSI|1|BA|G|105
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain B1
- 39S ribosomal protein L28, mitochondrial
- Chain B2
- Mitochondrial ribosomal protein L47
- Chain BF
- Mitochondrial ribosomal protein L4
- Chain BU
- 39S ribosomal protein L20, mitochondrial isoform 1
- Chain Bh
- 39S ribosomal protein L44, mitochondrial
- Chain Bn
- 39S ribosomal protein L51, mitochondrial
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