3D structure

PDB id
7NSI (explore in PDB, NAKB, or RNA 3D Hub)
Description
55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
Experimental method
ELECTRON MICROSCOPY
Resolution
4.6 Å

Loop

Sequence
CAAA*UUUAG
Length
9 nucleotides
Bulged bases
7NSI|1|BA|U|228
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NSI|1|BA|C|216
7NSI|1|BA|A|217
7NSI|1|BA|A|218
7NSI|1|BA|A|219
*
7NSI|1|BA|U|226
7NSI|1|BA|U|227
7NSI|1|BA|U|228
7NSI|1|BA|A|229
7NSI|1|BA|G|230

Current chains

Chain BA
16S rRNA

Nearby chains

Chain B8
39S ribosomal protein L35, mitochondrial
Chain BF
Mitochondrial ribosomal protein L4
Chain BP
39S ribosomal protein L15, mitochondrial
Chain Bb
39S ribosomal protein L38, mitochondrial
Chain Bl
39S ribosomal protein L49, mitochondrial

Coloring options:

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