IL_7NSI_056

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GC*GAC

Length

5 nucleotides

Bulged bases

7NSI|1|BA|A|311

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NSI_056 not in the Motif Atlas

Homologous match to IL_5J7L_261

Geometric discrepancy: 0.1415

The information below is about IL_5J7L_261

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

7NSI|1|BA|G|265
7NSI|1|BA|C|266
*
7NSI|1|BA|G|310
7NSI|1|BA|A|311
7NSI|1|BA|C|312

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BD

Ribosomal_L2_C domain-containing protein